STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46788.1GHMP kinase, N-terminal domain protein; KEGG: dde:Dde_3653 3.7e-70 galactokinase K00849; COG: COG0153 Galactokinase; Psort location: Cytoplasmic, score: 8.87; Belongs to the GHMP kinase family. (426 aa)    
Predicted Functional Partners:
galT
UTP--hexose-1-phosphate uridylyltransferase; KEGG: cac:CAC2961 1.1e-143 galT; galactose-1-phosphate uridyltransferase K00964; COG: COG4468 Galactose-1-phosphate uridyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.999
EDR46537.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 0.991
galE
KEGG: bsu:BG11837 4.9e-123 galE; UDP-glucose 4-epimerase K01784; COG: COG1087 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 0.983
EDR46325.1
Oxidoreductase, NAD-binding domain protein; KEGG: rba:RB7494 6.7e-09 probable NADH-dependent dyhydrogenase related protein; COG: COG0673 Predicted dehydrogenases and related proteins; Psort location: Cytoplasmic, score: 8.87.
  
 0.923
EDR46786.1
Hypothetical protein; KEGG: msm:MSMEG_3095 1.1e-17 D-ribose-binding periplasmic protein; COG: COG1879 ABC-type sugar transport system, periplasmic component.
 
   0.696
EDR46784.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bha:BH3447 2.0e-64 two-component sensor histidine kinase K07718; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
     0.633
EDR46785.1
Hypothetical protein; COG: COG1879 ABC-type sugar transport system, periplasmic component.
  
   0.626
EDR45569.1
KEGG: cpr:CPR_0550 2.6e-163 fructose specific permease K00890; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.581
EDR46783.1
Response regulator receiver domain protein; KEGG: ava:Ava_2028 4.1e-15 two component transcriptional regulator, LuxR family; COG: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
       0.576
EDR46787.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.576
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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