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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46800.1YaiI/YqxD family protein; COG: COG1671 Uncharacterized protein conserved in bacteria; Belongs to the UPF0178 family. (151 aa)    
Predicted Functional Partners:
EDR46801.1
Hypothetical protein; KEGG: pfu:PF1108 2.9e-08 putative alpha-dextrin endo-1,6-alpha-glucosidase K01200; COG: COG2819 Predicted hydrolase of the alpha/beta superfamily; Psort location: Cytoplasmic, score: 8.87.
       0.778
EDR46799.1
KEGG: ilo:IL2527 3.7e-06 vsr; DNA mismatch endonuclease, patch repair protein K07458; Psort location: Extracellular, score: 8.82.
       0.565
EDR46802.1
Hypothetical protein; COG: COG1896 Predicted hydrolases of HD superfamily; Psort location: Cytoplasmic, score: 8.87.
       0.505
EDR46803.1
RNA methyltransferase, TrmH family; KEGG: ldb:Ldb0930 4.4e-67 tRNA/rRNA methyltransferase K00599; COG: COG0566 rRNA methylases; Psort location: Cytoplasmic, score: 8.87.
       0.457
EDR46804.1
ArsC family protein; KEGG: fnu:FN0052 2.1e-28 arsenate reductase; COG: COG1393 Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.
       0.437
EDR46798.1
Putative phage tail component domain protein; COG: COG4928 Predicted P-loop ATPase; Psort location: Cytoplasmic, score: 8.87.
       0.417
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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