Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR46802.1Hypothetical protein; COG: COG1896 Predicted hydrolases of HD superfamily; Psort location: Cytoplasmic, score: 8.87. (180 aa)    
Predicted Functional Partners:
EDR46803.1
RNA methyltransferase, TrmH family; KEGG: ldb:Ldb0930 4.4e-67 tRNA/rRNA methyltransferase K00599; COG: COG0566 rRNA methylases; Psort location: Cytoplasmic, score: 8.87.
  
    0.659
EDR46804.1
ArsC family protein; KEGG: fnu:FN0052 2.1e-28 arsenate reductase; COG: COG1393 Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.
       0.658
EDR46805.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.526
EDR46785.1
Hypothetical protein; COG: COG1879 ABC-type sugar transport system, periplasmic component.
 
     0.517
EDR46800.1
YaiI/YqxD family protein; COG: COG1671 Uncharacterized protein conserved in bacteria; Belongs to the UPF0178 family.
       0.506
EDR46801.1
Hypothetical protein; KEGG: pfu:PF1108 2.9e-08 putative alpha-dextrin endo-1,6-alpha-glucosidase K01200; COG: COG2819 Predicted hydrolase of the alpha/beta superfamily; Psort location: Cytoplasmic, score: 8.87.
       0.504
EDR46677.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.461
EDR46108.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bcz:BCZK4751 3.7e-31 resE; sensor histidine kinase; COG: COG5002 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
  
     0.432
EDR46107.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.427
EDR46806.1
Putative polyphosphate:AMP phosphotransferase; KEGG: ret:RHE_PC00203 1.5e-43 hypothetical protein K00937; COG: COG2326 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
       0.407
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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