STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46805.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (87 aa)    
Predicted Functional Partners:
EDR46803.1
RNA methyltransferase, TrmH family; KEGG: ldb:Ldb0930 4.4e-67 tRNA/rRNA methyltransferase K00599; COG: COG0566 rRNA methylases; Psort location: Cytoplasmic, score: 8.87.
       0.613
EDR46804.1
ArsC family protein; KEGG: fnu:FN0052 2.1e-28 arsenate reductase; COG: COG1393 Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.
       0.613
EDR46806.1
Putative polyphosphate:AMP phosphotransferase; KEGG: ret:RHE_PC00203 1.5e-43 hypothetical protein K00937; COG: COG2326 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
       0.580
EDR46802.1
Hypothetical protein; COG: COG1896 Predicted hydrolases of HD superfamily; Psort location: Cytoplasmic, score: 8.87.
       0.526
EDR46807.1
Putative Flavodoxin; KEGG: eci:UTI89_C3072 0.0052 norV; anaerobic nitric oxide reductase flavorubredoxin; COG: COG0655 Multimeric flavodoxin WrbA; Psort location: Cytoplasmic, score: 8.87.
       0.420
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.