STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46846.1Peptidase, S8/S53 family; KEGG: cpf:CPF_2369 2.9e-54 subtilase family protein; COG: COG1404 Subtilisin-like serine proteases; Psort location: Cytoplasmic, score: 8.87. (608 aa)    
Predicted Functional Partners:
EDR47468.1
Hypothetical protein; KEGG: mmu:15204 0.00013 Herc2; hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2 K03874; COG: KOG1426 FOG: RCC1 domain; Psort location: Cytoplasmic, score: 8.87.
   
 0.910
EDR47202.1
Peptidase, S8/S53 family; KEGG: mba:Mbar_A1626 2.3e-42 hypothetical protein; COG: COG1404 Subtilisin-like serine proteases; Psort location: Extracellular, score: 8.10.
 
 0.817
EDR48020.1
Putative peptidoglycan binding domain protein; KEGG: cac:CAC0554 0.0056 lyc; autolytic lysozime (1,4-beta-N-acetylmuramidase), family 25 of glycosyl hydrolases; peptodoglycan-binding domain K01185; COG: NOG36567 non supervised orthologous group.
  
 0.814
EDR46591.1
LysM domain protein; COG: COG1388 FOG: LysM repeat; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.767
EDR47258.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.763
EDR46845.1
Rubrerythrin; KEGG: cpr:CPR_0938 1.9e-25 periplasmic [Fe] hydrogenase 1 K00532; COG: COG1592 Rubrerythrin; Psort location: Cytoplasmic, score: 8.87.
       0.757
EDR46843.1
Glycosyltransferase, group 2 family protein; KEGG: lsl:LSL_0011 6.3e-91 rfaG; glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
  
   0.755
EDR46310.1
LysM domain protein; KEGG: lsl:LSL_0304 0.00017 phage lysin K01185; COG: COG1652 Uncharacterized protein containing LysM domain.
  
  
 0.747
EDR46844.1
Putative membrane protein; KEGG: det:DET0932 0.0021 proton-translocating NADH-quinone oxidoreductase, M subunit K00342; COG: COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; Psort location: CytoplasmicMembrane, score: 9.99.
       0.741
EDR46287.1
Spore coat protein, CotS family; COG: NOG09979 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.740
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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