STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46857.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. (214 aa)    
Predicted Functional Partners:
EDR46855.1
Bacterial mobilization protein MobC; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR46856.1
Relaxase/mobilization nuclease domain protein; KEGG: xtr:407915 0.0022 ppig; peptidyl-prolyl isomerase G (cyclophilin G) K01802; COG: COG3843 Type IV secretory pathway, VirD2 components (relaxase); Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR46858.1
Hypothetical protein.
       0.746
EDR46854.1
Hypothetical protein; KEGG: rde:RD1_3177 0.00070 cobK; precorrin-6A reductase, putative.
       0.436
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.