STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46885.1Hypothetical protein. (70 aa)    
Predicted Functional Partners:
EDR46886.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.950
EDR46887.1
Hypothetical protein; COG: NOG17367 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.949
EDR46884.1
Hypothetical protein; ORF located using Blastx.
 
     0.943
EDR46889.1
Hypothetical protein; COG: NOG36404 non supervised orthologous group.
 
     0.835
EDR46891.1
Hypothetical protein; KEGG: nme:NMB0700 8.8e-10 IgA-specific serine endopeptidase K01347; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
 
     0.827
EDR46890.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.824
EDR46874.1
Hypothetical protein; COG: NOG21981 non supervised orthologous group.
  
     0.767
EDR46882.1
Relaxase/mobilization nuclease domain protein; COG: COG3843 Type IV secretory pathway, VirD2 components (relaxase).
  
     0.765
EDR46894.1
Hypothetical protein; COG: NOG33085 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.75.
 
     0.764
EDR46900.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.764
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.