STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46891.1Hypothetical protein; KEGG: nme:NMB0700 8.8e-10 IgA-specific serine endopeptidase K01347; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins). (689 aa)    
Predicted Functional Partners:
EDR46889.1
Hypothetical protein; COG: NOG36404 non supervised orthologous group.
 
     0.922
EDR46890.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.922
EDR46894.1
Hypothetical protein; COG: NOG33085 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.75.
 
     0.919
EDR46893.1
Hypothetical protein; COG: COG3451 Type IV secretory pathway, VirB4 components; Psort location: Cytoplasmic, score: 8.87.
 
    0.849
EDR46892.1
KEGG: sth:STH334 7.3e-65 DNA modification methylase M.SthI K07319; COG: COG0863 DNA modification methylase; Psort location: Cytoplasmic, score: 8.87; Belongs to the N(4)/N(6)-methyltransferase family.
 
    0.842
EDR46885.1
Hypothetical protein.
 
     0.827
EDR46887.1
Hypothetical protein; COG: NOG17367 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.822
EDR46886.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.797
EDR46882.1
Relaxase/mobilization nuclease domain protein; COG: COG3843 Type IV secretory pathway, VirD2 components (relaxase).
  
     0.758
EDR45428.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.758
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.