Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Experiments
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[Homology]
Score
EDR46897.1Hypothetical protein. (56 aa)    
Predicted Functional Partners:
EDR46898.1
TraG/TraD family protein; COG: COG3505 Type IV secretory pathway, VirD4 components; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR46899.1
Hypothetical protein; KEGG: lac:LBA1588 0.00036 prtM; PrtM precursor K07533; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR46900.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.657
EDR46901.1
Hypothetical protein; KEGG: hpa:HPAG1_1000 0.0049 autophosphorylating histidine kinase; COG: NOG34358 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.595
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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