STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46900.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (73 aa)    
Predicted Functional Partners:
EDR46901.1
Hypothetical protein; KEGG: hpa:HPAG1_1000 0.0049 autophosphorylating histidine kinase; COG: NOG34358 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.916
EDR46899.1
Hypothetical protein; KEGG: lac:LBA1588 0.00036 prtM; PrtM precursor K07533; Psort location: Cytoplasmic, score: 8.87.
 
     0.893
EDR46885.1
Hypothetical protein.
  
     0.764
EDR46898.1
TraG/TraD family protein; COG: COG3505 Type IV secretory pathway, VirD4 components; Psort location: Cytoplasmic, score: 8.87.
 
     0.686
EDR46884.1
Hypothetical protein; ORF located using Blastx.
  
     0.685
EDR46882.1
Relaxase/mobilization nuclease domain protein; COG: COG3843 Type IV secretory pathway, VirD2 components (relaxase).
  
    0.682
EDR46874.1
Hypothetical protein; COG: NOG21981 non supervised orthologous group.
  
     0.677
EDR46886.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.670
EDR46897.1
Hypothetical protein.
       0.657
EDR46887.1
Hypothetical protein; COG: NOG17367 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.639
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.