STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR46906.1Hypothetical protein; KEGG: cgl:NCgl0040 1.7e-26 cgl0041; serine/threonine protein kinase K08884; COG: COG2815 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 9.98. (280 aa)    
Predicted Functional Partners:
stp
Serine/threonine phosphatase stp; KEGG: bli:BL02301 6.1e-45 prpC; protein phosphatase K01090; COG: COG0631 Serine/threonine protein phosphatase; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.839
EDR46026.1
KEGG: cpt:CpB0409 2.7e-19 protein phosphatase K01090; COG: COG0631 Serine/threonine protein phosphatase; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.828
EDR46907.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.762
EDR46905.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.761
EDR46191.1
Hypothetical protein; COG: COG1716 FOG: FHA domain; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.706
EDR46902.1
Recombinase; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score: 8.87.
   
   0.496
EDR46903.1
Resolvase, N-terminal domain protein; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score: 8.87.
   
   0.496
tnpX
TnpX site-specific recombinase; KEGG: rno:309804 0.0023 Cdc2l6_predicted; cell division cycle 2-like 6 (CDK8-like) (predicted) K02208; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score: 8.87.
   
   0.496
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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