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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agcS-3Amino acid carrier protein; KEGG: hpa:HPAG1_0925 2.4e-59 D-alanine glycine permease K01613; COG: COG1115 Na+/alanine symporter; Psort location: CytoplasmicMembrane, score: 10.00. (463 aa)    
Predicted Functional Partners:
EDR46580.1
Hypothetical protein; KEGG: hpa:HPAG1_0925 7.2e-15 D-alanine glycine permease K01613; COG: COG1115 Na+/alanine symporter.
  
     0.599
EDR46908.1
ATPase family associated with various cellular activities (AAA); KEGG: bcz:BCZK0535 8.0e-36 norQ; probable nitric-oxide reductase K04748; COG: COG0714 MoxR-like ATPases; Psort location: Cytoplasmic, score: 8.87.
       0.547
EDR46909.1
Hypothetical protein; KEGG: mag:amb2942 0.00035 nitric oxide reductase activation protein K02448; COG: COG4548 Nitric oxide reductase activation protein; Psort location: Cytoplasmic, score: 8.87.
       0.547
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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