Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDR45671.1 | EDR45870.1 | DORFOR_02272 | DORFOR_02471 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. | KEGG: rha:RHA1_ro08466 9.6e-127 gcvPb; glycine dehydrogenase (decarboxylating) subunit 2 K00283; COG: COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain; Psort location: Cytoplasmic, score: 8.87. | 0.400 |
| EDR45671.1 | EDR45871.1 | DORFOR_02272 | DORFOR_02472 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.472 |
| EDR45671.1 | EDR46920.1 | DORFOR_02272 | DORFOR_02155 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. | KEGG: ctc:CTC02045 3.7e-77 lipoate-protein ligase A K03800; COG: COG0095 Lipoate-protein ligase A; Psort location: Cytoplasmic, score: 9.98. | 0.942 |
| EDR45671.1 | gcvH | DORFOR_02272 | DORFOR_02152 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.940 |
| EDR45671.1 | gcvPB | DORFOR_02272 | DORFOR_02154 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. | Glycine dehydrogenase subunit 2; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily. | 0.400 |
| EDR45671.1 | gcvT | DORFOR_02272 | DORFOR_02151 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | 0.798 |
| EDR45671.1 | glyA-2 | DORFOR_02272 | DORFOR_02150 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.415 |
| EDR45870.1 | EDR45671.1 | DORFOR_02471 | DORFOR_02272 | KEGG: rha:RHA1_ro08466 9.6e-127 gcvPb; glycine dehydrogenase (decarboxylating) subunit 2 K00283; COG: COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain; Psort location: Cytoplasmic, score: 8.87. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. | 0.400 |
| EDR45870.1 | EDR45871.1 | DORFOR_02471 | DORFOR_02472 | KEGG: rha:RHA1_ro08466 9.6e-127 gcvPb; glycine dehydrogenase (decarboxylating) subunit 2 K00283; COG: COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain; Psort location: Cytoplasmic, score: 8.87. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.998 |
| EDR45870.1 | gcvH | DORFOR_02471 | DORFOR_02152 | KEGG: rha:RHA1_ro08466 9.6e-127 gcvPb; glycine dehydrogenase (decarboxylating) subunit 2 K00283; COG: COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain; Psort location: Cytoplasmic, score: 8.87. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.995 |
| EDR45870.1 | gcvPA | DORFOR_02471 | DORFOR_02153 | KEGG: rha:RHA1_ro08466 9.6e-127 gcvPb; glycine dehydrogenase (decarboxylating) subunit 2 K00283; COG: COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain; Psort location: Cytoplasmic, score: 8.87. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.999 |
| EDR45870.1 | gcvT | DORFOR_02471 | DORFOR_02151 | KEGG: rha:RHA1_ro08466 9.6e-127 gcvPb; glycine dehydrogenase (decarboxylating) subunit 2 K00283; COG: COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain; Psort location: Cytoplasmic, score: 8.87. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | 0.992 |
| EDR45870.1 | glyA-2 | DORFOR_02471 | DORFOR_02150 | KEGG: rha:RHA1_ro08466 9.6e-127 gcvPb; glycine dehydrogenase (decarboxylating) subunit 2 K00283; COG: COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain; Psort location: Cytoplasmic, score: 8.87. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.887 |
| EDR45870.1 | lpdA | DORFOR_02471 | DORFOR_02157 | KEGG: rha:RHA1_ro08466 9.6e-127 gcvPb; glycine dehydrogenase (decarboxylating) subunit 2 K00283; COG: COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain; Psort location: Cytoplasmic, score: 8.87. | Dihydrolipoyl dehydrogenase; KEGG: ctc:CTC02047 2.4e-98 dihydrolipoamide dehydrogenase K00382; COG: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; Psort location: Cytoplasmic, score: 9.98. | 0.843 |
| EDR45871.1 | EDR45671.1 | DORFOR_02472 | DORFOR_02272 | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. | 0.472 |
| EDR45871.1 | EDR45870.1 | DORFOR_02472 | DORFOR_02471 | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | KEGG: rha:RHA1_ro08466 9.6e-127 gcvPb; glycine dehydrogenase (decarboxylating) subunit 2 K00283; COG: COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain; Psort location: Cytoplasmic, score: 8.87. | 0.998 |
| EDR45871.1 | gcvH | DORFOR_02472 | DORFOR_02152 | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.982 |
| EDR45871.1 | gcvPB | DORFOR_02472 | DORFOR_02154 | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Glycine dehydrogenase subunit 2; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily. | 0.998 |
| EDR45871.1 | gcvT | DORFOR_02472 | DORFOR_02151 | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | 0.993 |
| EDR45871.1 | glyA-2 | DORFOR_02472 | DORFOR_02150 | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.842 |
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