STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45560.1Putative glycine/sarcosine/betaine reductase complex component A1; KEGG: tde:TDE0745 4.9e-36 grdA; glycine reductase complex selenoprotein GrdA; COG: NOG11771 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (108 aa)    
Predicted Functional Partners:
EDR45561.1
KEGG: chy:CHY_2392 1.2e-14 grdA; glycine reductase, selenoprotein A; COG: NOG11771 non supervised orthologous group.
 
     0.941
EDR48611.1
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; KEGG: chy:CHY_2393 5.4e-101 grdB; glycine reductase, selenoprotein B; COG: NOG06475 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.811
EDR47996.1
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; KEGG: chy:CHY_2393 4.2e-117 grdB; glycine reductase, selenoprotein B; COG: NOG06475 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.811
grdH
Betaine reductase complex component B subunit beta; KEGG: chy:CHY_2393 3.2e-80 grdB; glycine reductase, selenoprotein B; COG: NOG06475 non supervised orthologous group.
 
   
 0.810
EDR48192.1
KEGG: chy:CHY_2393 1.2e-73 grdB; glycine reductase, selenoprotein B; COG: NOG06475 non supervised orthologous group.
 
   
 0.808
EDR48612.1
Glycine/sarcosine/betaine reductase component B subunit alpha and beta; KEGG: chy:CHY_2391 5.2e-135 grdE; glycine reductase proprotein GrdE; COG: NOG06476 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.804
grdE
Glycine reductase, subunit ABC; KEGG: tte:TTE1879 2.5e-151 GrdE proprotein; COG: NOG06476 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.804
EDR48606.1
KEGG: chy:CHY_2393 2.8e-19 grdB; glycine reductase, selenoprotein B; COG: NOG06475 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.796
grdC
Glycine reductase complex component C, beta subunit; KEGG: tte:TTE1875 1.7e-159 fabH4; 3-oxoacyl-(acyl-carrier-protein) synthase III; COG: NOG06474 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.794
grdI
Betaine reductase complex component B subunit alpha; KEGG: tte:TTE1879 3.5e-90 GrdE proprotein; COG: NOG06476 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.791
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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