STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45587.1Hypothetical protein; Psort location: Extracellular, score: 8.82. (52 aa)    
Predicted Functional Partners:
EDR45585.1
Addiction module toxin, RelE/StbE family; COG: NOG13941 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR45586.1
Addiction module antitoxin, RelB/DinJ family; COG: COG3077 DNA-damage-inducible protein J.
       0.773
EDR45588.1
Alpha amylase, catalytic domain protein; KEGG: bca:BCE_4066 5.0e-185 malL; oligo-1,6-glucosidase K01182; COG: COG0366 Glycosidases; Psort location: Cytoplasmic, score: 9.55.
       0.553
EDR45584.1
Hypothetical protein.
       0.453
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.