Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR45589.1Hypothetical protein; COG: NOG06168 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (189 aa)    
Predicted Functional Partners:
EDR45590.1
Hypothetical protein.
       0.624
EDR48010.1
Transposase, IS4 family; COG: COG3385 FOG: Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
  
     0.587
EDR47270.1
Transposase, IS4 family; COG: COG3385 FOG: Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
  
     0.587
EDR47295.1
Transposase, IS4 family; COG: COG3385 FOG: Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
  
     0.587
EDR46307.1
Transposase, IS4 family; COG: COG3385 FOG: Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
  
     0.587
EDR45588.1
Alpha amylase, catalytic domain protein; KEGG: bca:BCE_4066 5.0e-185 malL; oligo-1,6-glucosidase K01182; COG: COG0366 Glycosidases; Psort location: Cytoplasmic, score: 9.55.
       0.515
EDR47209.1
Hypothetical protein.
  
     0.487
EDR45820.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.26.
  
     0.464
EDR47518.1
Hypothetical protein; KEGG: rno:309804 1.3e-25 Cdc2l6_predicted; cell division cycle 2-like 6 (CDK8-like) (predicted) K02208; COG: COG1340 Uncharacterized archaeal coiled-coil protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.428
EDR46771.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.425
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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