STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR45593.1ABC transporter, ATP-binding protein; KEGG: rru:Rru_A2339 1.8e-70 ABC transporter component K06021; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00. (579 aa)    
Predicted Functional Partners:
EDR45595.1
KEGG: bpm:BURPS1710b_A2293 1.1e-05 TetR-family regulatory protein K00356; COG: COG1309 Transcriptional regulator.
 
     0.845
EDR45594.1
KEGG: rru:Rru_A0864 3.1e-73 ABC transporter, transmembrane region K06020; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 9.99.
 
    
0.814
EDR46861.1
COG: COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.740
EDR46860.1
Conserved hypothetical protein TIGR02185; COG: NOG13235 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.739
EDR46865.1
KEGG: bpm:BURPS1710b_A2293 6.1e-05 TetR-family regulatory protein K00356; COG: COG1309 Transcriptional regulator.
  
     0.728
EDR45596.1
BAAT/acyl-CoA thioester hydrolase C-terminal domain protein; KEGG: bld:BLi01024 1.4e-12 hypothetical protein K01068; COG: COG1073 Hydrolases of the alpha/beta superfamily; Psort location: Cytoplasmic, score: 8.87.
 
    0.640
EDR45597.1
O-methyltransferase domain protein; KEGG: fnu:FN0388 3.0e-36 tetracenomycin polyketide synthesis O-methyltransferase TcmP K00599; COG: COG3315 O-Methyltransferase involved in polyketide biosynthesis.
 
     0.628
EDR46859.1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 1.8e-10 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score: 9.06.
  
    0.508
EDR45592.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.497
EDR45591.1
Kinase, PfkB family; KEGG: ath:At2g31390 3.8e-61 T28P16.12; pfkB-type carbohydrate kinase family protein K00847; COG: COG0524 Sugar kinases, ribokinase family; Psort location: Cytoplasmic, score: 9.98.
   
   0.474
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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