STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45599.1Ketopantoate reductase PanE/ApbA; KEGG: fra:Francci3_1861 3.0e-09 2-dehydropantoate 2-reductase K00077; COG: COG1893 Ketopantoate reductase; Psort location: Cytoplasmic, score: 8.87. (300 aa)    
Predicted Functional Partners:
EDR48287.1
Lipase/acylhydrolase, GDSL family; KEGG: fra:Francci3_1861 4.7e-09 2-dehydropantoate 2-reductase K00077; COG: COG1893 Ketopantoate reductase.
  
  
 
0.900
EDR45596.1
BAAT/acyl-CoA thioester hydrolase C-terminal domain protein; KEGG: bld:BLi01024 1.4e-12 hypothetical protein K01068; COG: COG1073 Hydrolases of the alpha/beta superfamily; Psort location: Cytoplasmic, score: 8.87.
 
     0.807
EDR45597.1
O-methyltransferase domain protein; KEGG: fnu:FN0388 3.0e-36 tetracenomycin polyketide synthesis O-methyltransferase TcmP K00599; COG: COG3315 O-Methyltransferase involved in polyketide biosynthesis.
       0.777
EDR45598.1
Hypothetical protein; COG: COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); Psort location: Cytoplasmic, score: 8.87.
  
    0.773
EDR45595.1
KEGG: bpm:BURPS1710b_A2293 1.1e-05 TetR-family regulatory protein K00356; COG: COG1309 Transcriptional regulator.
       0.504
EDR45600.1
Hypothetical protein; KEGG: sat:SYN_01231 3.6e-24 cytidylate kinase K00945; COG: NOG14451 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.455
sdhB
KEGG: sha:SH1812 1.0e-35 sdhB; succinate dehydrogenase iron-sulfur protein subunit K00240; COG: COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit.
  
     0.445
sdhA
KEGG: gka:GK2672 5.6e-83 sdhA; succinate dehydrogenase (flavoprotein subunit) K00239; COG: COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Psort location: Cytoplasmic, score: 9.36.
  
     0.439
EDR45601.1
MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 9.99.
       0.437
EDR45594.1
KEGG: rru:Rru_A0864 3.1e-73 ABC transporter, transmembrane region K06020; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.410
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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