STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45607.1Hypothetical protein; COG: NOG16889 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (164 aa)    
Predicted Functional Partners:
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
  
   0.690
EDR46541.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: vfi:VF0494 1.4e-45 sensory transduction protein kinase; COG: COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.645
EDR45608.1
Cyclic nucleotide-binding domain protein; KEGG: cfa:487827 0.00051 LOC487827; similar to protein kinase, cGMP-dependent, type II K07376; COG: COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; Psort location: CytoplasmicMembrane, score: 9.75.
       0.533
EDR48218.1
Hypothetical protein; KEGG: abo:ABO_0442 8.9e-07 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: Cytoplasmic, score: 8.87.
     
 0.403
azlD
COG: COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance).
  
     0.403
EDR45609.1
4Fe-4S binding domain protein; KEGG: sat:SYN_00694 6.2e-07 pyruvate synthase delta subunit K00168; COG: COG1145 Ferredoxin; Psort location: Cytoplasmic, score: 8.87.
  
    0.400
EDR46371.1
Hypothetical protein; COG: COG1296 Predicted branched-chain amino acid permease (azaleucine resistance); Psort location: CytoplasmicMembrane, score: 9.75.
  
     0.400
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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