STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR45632.1Hypothetical protein. (171 aa)    
Predicted Functional Partners:
EDR45633.1
ABC1 family protein; KEGG: psp:PSPPH_0370 4.3e-44 ubiB; 2-polyprenylphenol 6-hydroxylase K03688; COG: COG0661 Predicted unusual protein kinase; Psort location: Cytoplasmic, score: 8.87.
       0.539
EDR45634.1
Hypothetical protein; COG: COG3937 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
       0.539
EDR45631.1
MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 9.99.
       0.473
EDR45635.1
KEGG: bca:BCE_4382 2.9e-31 dgkA; diacylglycerol kinase K00901; COG: COG0818 Diacylglycerol kinase; Psort location: CytoplasmicMembrane, score: 9.99.
       0.419
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.