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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45633.1ABC1 family protein; KEGG: psp:PSPPH_0370 4.3e-44 ubiB; 2-polyprenylphenol 6-hydroxylase K03688; COG: COG0661 Predicted unusual protein kinase; Psort location: Cytoplasmic, score: 8.87. (528 aa)    
Predicted Functional Partners:
EDR45634.1
Hypothetical protein; COG: COG3937 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.944
EDR45635.1
KEGG: bca:BCE_4382 2.9e-31 dgkA; diacylglycerol kinase K00901; COG: COG0818 Diacylglycerol kinase; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.706
EDR45632.1
Hypothetical protein.
       0.539
EDR47856.1
Glycosyltransferase, group 2 family protein; KEGG: gbe:GbCGDNIH1_2152 1.6e-68 glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.533
EDR47737.1
Methyltransferase domain protein; KEGG: bce:BC4326 3.4e-44 methyltransferase K00599; COG: COG0500 SAM-dependent methyltransferases; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.452
EDR47508.1
Hypothetical protein; KEGG: aci:ACIAD2995 4.2e-46 putative methyltransferase K00599; COG: COG0500 SAM-dependent methyltransferases; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.452
recJ
KEGG: cac:CAC2232 2.2e-143 recJ; SsDNA exonuclease, RecJ K07462; COG: COG0608 Single-stranded DNA-specific exonuclease; Psort location: Cytoplasmic, score: 8.87.
      0.449
EDR45533.1
Hypothetical protein; KEGG: sdy:SDY_4054 5.0e-06 waaL; lipid A-core:surface polymer ligase WaaL K02847; COG: COG3307 Lipid A core - O-antigen ligase and related enzymes; Psort location: CytoplasmicMembrane, score: 9.99.
   
 
 0.401
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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