Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDR45648.1Glyoxalase family protein; KEGG: bce:BC2993 5.5e-05 lactoylglutathione lyase K01759; COG: COG0346 Lactoylglutathione lyase and related lyases. (132 aa)    
Predicted Functional Partners:
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.653
EDR45649.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.531
EDR46431.1
Hypothetical protein; KEGG: bca:BCE_2370 3.7e-05 penicillin-binding protein 1A K05366; COG: NOG14194 non supervised orthologous group.
  
     0.526
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.474
EDR45654.1
Nitroreductase family protein; KEGG: sat:SYN_01293 2.7e-28 oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase K00357; COG: COG0778 Nitroreductase; Psort location: Cytoplasmic, score: 8.87.
  
    0.453
EDR47802.1
Hypothetical protein.
  
     0.447
EDR46661.1
Transcriptional regulator, PadR family; COG: COG1695 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
  
     0.427
EDR45653.1
Hypothetical protein; COG: COG0666 FOG: Ankyrin repeat; Psort location: Cytoplasmic, score: 8.87.
 
    0.411
EDR47118.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.403
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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