STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR45649.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (136 aa)    
Predicted Functional Partners:
EDR47489.1
Selenium-dependent molybdenum hydroxylase system protein, YqeB family; COG: COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; Psort location: Cytoplasmic, score: 8.87.
    
   0.743
EDR47398.1
Cysteine desulfurase family protein; KEGG: mta:Moth_2214 4.9e-84 cysteine desulphurase related, unknown function K01763; COG: COG0520 Selenocysteine lyase; Psort location: Cytoplasmic, score: 8.87.
    
   0.743
EDR45648.1
Glyoxalase family protein; KEGG: bce:BC2993 5.5e-05 lactoylglutathione lyase K01759; COG: COG0346 Lactoylglutathione lyase and related lyases.
       0.531
EDR45651.1
Flavin reductase; KEGG: bcz:BCZK3002 5.5e-06 NAD(P)H dehydrogenase, quinone family K00355; COG: COG0655 Multimeric flavodoxin WrbA; Psort location: Cytoplasmic, score: 8.87.
  
    0.473
EDR45650.1
Hypothetical protein; KEGG: sso:SSO2015 3.1e-05 protease, putative K01423; Psort location: Cytoplasmic, score: 8.87.
  
    0.469
mprF
Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
  
  
 0.404
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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