Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDR45654.1Nitroreductase family protein; KEGG: sat:SYN_01293 2.7e-28 oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase K00357; COG: COG0778 Nitroreductase; Psort location: Cytoplasmic, score: 8.87. (192 aa)    
Predicted Functional Partners:
EDR45655.1
Topoisomerase DNA-binding C4 zinc finger domain protein; KEGG: pab:PAB1430 5.2e-06 topA; DNA topoisomerase I K03168; COG: COG0514 Superfamily II DNA helicase; Psort location: Cytoplasmic, score: 8.87.
       0.631
EDR47723.1
Hypothetical protein; COG: COG0842 ABC-type multidrug transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.556
EDR45653.1
Hypothetical protein; COG: COG0666 FOG: Ankyrin repeat; Psort location: Cytoplasmic, score: 8.87.
       0.550
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.537
EDR46527.1
Nitroreductase family protein; KEGG: fnu:FN1254 1.9e-11 oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase K00357; COG: COG0778 Nitroreductase.
  
     0.537
EDR47264.1
Glyoxalase family protein; KEGG: fnu:FN0356 4.7e-38 lactoylglutathione lyase K01759; COG: COG0346 Lactoylglutathione lyase and related lyases.
  
    0.523
EDR47722.1
Hypothetical protein; COG: COG0842 ABC-type multidrug transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.515
EDR45651.1
Flavin reductase; KEGG: bcz:BCZK3002 5.5e-06 NAD(P)H dehydrogenase, quinone family K00355; COG: COG0655 Multimeric flavodoxin WrbA; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.480
EDR45648.1
Glyoxalase family protein; KEGG: bce:BC2993 5.5e-05 lactoylglutathione lyase K01759; COG: COG0346 Lactoylglutathione lyase and related lyases.
  
    0.453
EDR46567.1
CAAX amino terminal protease family protein; COG: COG1668 ABC-type Na+ efflux pump, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.434
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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