STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45659.1Replication initiation factor; COG: COG2946 Putative phage replication protein RstA; Psort location: Cytoplasmic, score: 8.87. (360 aa)    
Predicted Functional Partners:
EDR45661.1
DNA-binding helix-turn-helix protein; KEGG: blo:BL0712 5.4e-06 aspartate aminotransferase K00812; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
 
     0.827
EDR46519.1
DNA-binding helix-turn-helix protein; KEGG: blo:BL0712 1.1e-05 aspartate aminotransferase K00812; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
  
     0.738
EDR46479.1
Hypothetical protein; COG: NOG13238 non supervised orthologous group.
 
     0.735
EDR46127.1
Hypothetical protein; COG: NOG13238 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.75.
 
     0.733
EDR46129.1
Hypothetical protein; COG: NOG09588 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.692
EDR45658.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.628
EDR45660.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.547
EDR46120.1
Hypothetical protein; COG: NOG13239 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.544
EDR46482.1
Hypothetical protein; COG: NOG13239 non supervised orthologous group.
 
  
 0.543
EDR46711.1
KEGG: ljo:LJ1840 0.0020 cell wall-associated serine proteinase K01361; COG: COG4932 Predicted outer membrane protein; Psort location: Cellwall, score: 9.25.
  
     0.539
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.