STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45672.1ABC transporter, ATP-binding protein; KEGG: mja:MJ0412 5.4e-53 tauB; putative taurine transport system ATP-binding protein K02049; COG: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49. (308 aa)    
Predicted Functional Partners:
EDR45676.1
KEGG: rha:RHA1_ro08170 9.5e-17 ABC transporter, permease component; COG: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.952
EDR45673.1
Hypothetical protein.
 
     0.937
EDR45675.1
Hypothetical protein.
 
     0.935
EDR48402.1
Hypothetical protein; KEGG: aci:ACIAD1512 0.0066 putative dibenzothiophene desulfurization enzyme B K05977; COG: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
 
 0.922
EDR48403.1
KEGG: rha:RHA1_ro08170 2.6e-09 ABC transporter, permease component; COG: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.912
EDR45679.1
Hypothetical protein; COG: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
 
 0.908
EDR47164.1
KEGG: rha:RHA1_ro08170 5.1e-18 ABC transporter, permease component; COG: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.906
EDR45674.1
COG: COG0701 Predicted permeases; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.866
EDR48208.1
Hypothetical protein; COG: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.865
EDR45671.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.855
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.