STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45674.1COG: COG0701 Predicted permeases; Psort location: CytoplasmicMembrane, score: 9.99. (384 aa)    
Predicted Functional Partners:
EDR45675.1
Hypothetical protein.
 
     0.941
EDR45673.1
Hypothetical protein.
 
     0.940
EDR45671.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.874
EDR45672.1
ABC transporter, ATP-binding protein; KEGG: mja:MJ0412 5.4e-53 tauB; putative taurine transport system ATP-binding protein K02049; COG: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
     0.865
EDR45669.1
Hypothetical protein; COG: NOG14528 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.814
EDR47347.1
COG: COG0526 Thiol-disulfide isomerase and thioredoxins; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.786
EDR45682.1
Hypothetical protein.
 
     0.760
EDR45679.1
Hypothetical protein; COG: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
     0.731
EDR45676.1
KEGG: rha:RHA1_ro08170 9.5e-17 ABC transporter, permease component; COG: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.591
EDR45487.1
Putative TIGR03943 family protein; COG: COG3689 Predicted membrane protein; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.519
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.