Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR45721.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (329 aa)    
Predicted Functional Partners:
EDR46241.1
Hypothetical protein; COG: NOG13728 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.637
EDR48280.1
Hypothetical protein; COG: NOG13728 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.634
EDR47087.1
NlpC/P60 family protein; KEGG: bce:BC5234 2.5e-20 N-acetylmuramoyl-L-alanine amidase K01446; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Extracellular, score: 9.73.
  
     0.409
EDR45936.1
Hypothetical protein; COG: NOG08812 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.404
EDR45722.1
Hypothetical protein; KEGG: mmp:MMP0831 5.5e-21 mtbA; uroporphyrinogen decarboxylase (URO-D) K00599; Psort location: Cytoplasmic, score: 8.87.
       0.401
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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