Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDR45738.1YihY family protein; KEGG: cno:NT01CX_1516 9.9e-38 ribonuclease BN, putative; COG: COG1295 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the UPF0761 family. (273 aa)    
Predicted Functional Partners:
EDR48166.1
KEGG: bha:BH2238 1.4e-24 protein-tyrosine-phosphatase K01104; COG: COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.602
EDR45739.1
SpoIID/LytB domain protein; COG: COG2385 Sporulation protein and related proteins.
       0.530
EDR45737.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.460
EDR45736.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.417
EDR46080.1
NlpC/P60 family protein; KEGG: bat:BAS5084 6.5e-18 N-acetylmuramoyl-L-alanine amidase, C-terminus K01446; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Extracellular, score: 9.55.
     
 0.416
EDR48390.1
Putative phage head-tail adaptor; KEGG: cpf:CPF_2369 4.4e-67 subtilase family protein; COG: COG1404 Subtilisin-like serine proteases.
  
    0.413
EDR45916.1
Putative ATP-dependent nuclease subunit B; ATP-dependent DNA helicase.
 
     0.402
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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