STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45744.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (63 aa)    
Predicted Functional Partners:
EDR48260.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.611
EDR47408.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.553
EDR45743.1
Putative flagellar protein FliS; KEGG: pen:PSEEN3042 9.8e-64 macB; macrolide ABC efflux protein MacB; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 10.00.
       0.499
EDR45944.1
IMP cyclohydrolase-like protein; KEGG: mka:MK0087 1.5e-07 IMP cyclohydrolase K01492; COG: COG3363 Archaeal IMP cyclohydrolase; Psort location: Cytoplasmic, score: 8.87.
  
     0.499
EDR46311.1
Hypothetical protein.
  
     0.496
EDR45745.1
COG: COG4194 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.489
EDR45746.1
KEGG: bcz:BCZK3833 1.2e-09 transcriptional regulator, GntR family; COG: COG1725 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
       0.489
EDR47799.1
Hypothetical protein.
  
     0.466
EDR46603.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.75.
  
     0.463
EDR47812.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.454
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.