STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45750.1SNARE-like domain protein; KEGG: pat:Patl_3732 2.4e-05 phospholipase D K01115; COG: COG0398 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 9.99. (199 aa)    
Predicted Functional Partners:
EDR45751.1
Glycosyltransferase, group 1 family protein; KEGG: spd:SPD_0961 3.6e-56 glycosyl transferase, group 1 K00754; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
    0.882
EDR45749.1
Glycosyltransferase, group 1 family protein; KEGG: lsa:LSA1206 2.3e-61 putative glycosyl transferase, group 1 K00754; COG: COG0438 Glycosyltransferase.
 
    0.829
EDR45752.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.576
EDR45748.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.542
EDR45753.1
Hypothetical protein; KEGG: tde:TDE0008 0.00018 copper-translocating P-type ATPase K01533.
  
    0.444
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.