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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45768.1Hypothetical protein; KEGG: mpe:MYPE6470 0.00032 parC; DNA topoisomerase IV subunit A K02621; COG: KOG1181 FOG: Low-complexity; Psort location: CytoplasmicMembrane, score: 9.97. (303 aa)    
Predicted Functional Partners:
EDR45767.1
PHP domain protein; KEGG: mma:MM0508 1.1e-15 isoleucyl-tRNA synthetase K01870; COG: COG0613 Predicted metal-dependent phosphoesterases (PHP family); Psort location: Cytoplasmic, score: 8.87.
       0.775
EDR48201.1
Hypothetical protein; KEGG: tvo:TVN0733 0.0065 putative cytochrome bd-I oxidase subunit II K00426; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.752
EDR46677.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.752
EDR46696.1
Hypothetical protein; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.752
EDR46107.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.752
EDR46036.1
Hypothetical protein; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.596
EDR46047.1
Hypothetical protein; KEGG: wol:WD0969 0.00022 NADH dehydrogenase I, N subunit, putative K00343; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.596
EDR46439.1
Hypothetical protein; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.596
EDR45769.1
Hypothetical protein; KEGG: sat:SYN_01231 2.2e-17 cytidylate kinase K00945; COG: NOG14451 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.529
EDR45770.1
Hypothetical protein; COG: COG1055 Na+/H+ antiporter NhaD and related arsenite permeases; Psort location: CytoplasmicMembrane, score: 9.99.
       0.519
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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