STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45772.1Hypothetical protein; COG: NOG06142 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.97. (283 aa)    
Predicted Functional Partners:
EDR47694.1
Flavodoxin family protein; COG: COG0716 Flavodoxins.
  
     0.491
EDR45771.1
Hypothetical protein; KEGG: bja:bll5379 7.7e-08 probable adenylate kinase K00939; COG: COG5022 Myosin heavy chain.
       0.483
EDR47037.1
ABC transporter, solute-binding protein; COG: COG1653 ABC-type sugar transport system, periplasmic component.
  
     0.436
EDR45773.1
FCD domain protein; COG: COG2186 Transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
       0.412
EDR45377.1
Site-specific recombinase, phage integrase family; COG: COG0582 Integrase; Psort location: Cytoplasmic, score: 8.87; Belongs to the 'phage' integrase family.
  
     0.403
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.