STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45773.1FCD domain protein; COG: COG2186 Transcriptional regulators; Psort location: Cytoplasmic, score: 8.87. (356 aa)    
Predicted Functional Partners:
EDR46593.1
FCD domain protein; KEGG: msm:MSMEG_3400 7.2e-15 glutamyl-tRNA(Gln) amidotransferase subunit A K01957; COG: COG1802 Transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.793
EDR47452.1
Transcriptional regulator, GntR family; KEGG: msm:MSMEG_3400 1.3e-12 glutamyl-tRNA(Gln) amidotransferase subunit A K01957; COG: COG1802 Transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.792
EDR46988.1
FCD domain protein; KEGG: msm:MSMEG_3400 8.5e-11 glutamyl-tRNA(Gln) amidotransferase subunit A K01957; COG: COG1802 Transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.791
EDR45774.1
Allantoate amidohydrolase; KEGG: oih:OB3444 4.0e-80 N-carbamoyl-L-amino acid amidohydrolase K01463; COG: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; Psort location: Cytoplasmic, score: 8.87.
       0.723
accD
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
  
 0.671
EDR45776.1
Hypothetical protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
  
  
 0.651
EDR45775.1
Hypothetical protein.
       0.638
EDR46813.1
UbiC transcription regulator-associated domain protein; KEGG: reh:H16_A3019 3.4e-11 hutC; histidine utilization repressor; COG: COG2188 Transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
  
    0.526
EDR46340.1
Transcriptional regulator, IclR family, C-terminal domain protein; COG: COG1414 Transcriptional regulator; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.514
arcC
Carbamate kinase; KEGG: efa:EF2575 4.6e-95 arcC-4; carbamate kinase K00926; COG: COG0549 Carbamate kinase; Psort location: Cytoplasmic, score: 8.87.
       0.423
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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