STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
allDUreidoglycolate dehydrogenase; KEGG: bld:BLi01130 2.0e-110 yjmC; similar to malate dehydrogenase; RBL03081 K00073; COG: COG2055 Malate/L-lactate dehydrogenases; Psort location: Cytoplasmic, score: 8.87; Belongs to the LDH2/MDH2 oxidoreductase family. (350 aa)    
Predicted Functional Partners:
EDR45780.1
Putative allantoin catabolism protein; COG: COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization; Psort location: Cytoplasmic, score: 8.87.
 
  
  0.972
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
     
 0.893
EDR45778.1
Putative membrane protein FdrA; KEGG: ape:APE_1072.1 1.2e-11 succinyl-CoA synthetase alpha chain K01902; COG: COG0074 Succinyl-CoA synthetase, alpha subunit; Psort location: Cytoplasmic, score: 8.87.
 
    0.843
EDR45781.1
Hypothetical protein; KEGG: bur:Bcep18194_B0145 1.9e-05 esterase/lipase/thioesterase K01046; COG: COG0657 Esterase/lipase; Psort location: Cytoplasmic, score: 8.87.
 
     0.708
xylB
Xylulokinase; KEGG: mta:Moth_2025 8.6e-110 xylulokinase K00854; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87.
    
  0.625
EDR45774.1
Allantoate amidohydrolase; KEGG: oih:OB3444 4.0e-80 N-carbamoyl-L-amino acid amidohydrolase K01463; COG: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; Psort location: Cytoplasmic, score: 8.87.
 
 
  0.617
EDR46956.1
FAD dependent oxidoreductase; KEGG: mlo:mlr1283 5.5e-28 sarcosine dehydrogenase K00314; COG: COG0665 Glycine/D-amino acid oxidases (deaminating); Psort location: Cytoplasmic, score: 8.87.
  
  
 0.586
EDR45785.1
Hypothetical protein; COG: NOG22749 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.580
arcC
Carbamate kinase; KEGG: efa:EF2575 4.6e-95 arcC-4; carbamate kinase K00926; COG: COG0549 Carbamate kinase; Psort location: Cytoplasmic, score: 8.87.
       0.477
EDR45776.1
Hypothetical protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
   
 0.471
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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