STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45796.1Hypothetical protein; COG: COG2452 Predicted site-specific integrase-resolvase; Psort location: Cytoplasmic, score: 8.87. (106 aa)    
Predicted Functional Partners:
EDR45795.1
Transposase, IS605 OrfB family; COG: COG0675 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
 
    0.945
EDR47676.1
Transposase, IS605 OrfB family; COG: COG0675 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
 
    0.771
EDR46608.1
Transposase, IS605 OrfB family; COG: COG0675 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
 
    0.739
EDR45797.1
Peptidase M16 inactive domain protein; KEGG: hdu:HD0187 1.7e-09 ptrA; protease III K01407; COG: COG1026 Predicted Zn-dependent peptidases, insulinase-like; Psort location: Cytoplasmic, score: 8.87.
       0.510
era
Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.459
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.