STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45812.1KEGG: smu:SMU.100 3.5e-42 putative sorbose PTS system, IIB component K02794; COG: COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB; Psort location: Cytoplasmic, score: 9.98. (152 aa)    
Predicted Functional Partners:
EDR45810.1
KEGG: lsl:LSL_1714 4.9e-75 PTS system, mannose-specific IID component K00890; COG: COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.997
EDR45811.1
KEGG: lsl:LSL_1715 3.4e-67 PTS system, mannose-specific IIC component K00890; COG: COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.997
EDR45809.1
PTS system fructose IIA component; KEGG: ljo:LJ0742 3.8e-36 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, probable mannose specific K02793; COG: COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.993
EDR45569.1
KEGG: cpr:CPR_0550 2.6e-163 fructose specific permease K00890; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.967
ptsH
Phosphocarrier protein HPr; KEGG: btl:BALH_3665 1.4e-15 ptsH; phosphocarrier protein HPr K00889; COG: COG1925 Phosphotransferase system, HPr-related proteins; Psort location: Cytoplasmic, score: 10.00.
 
 
 0.693
EDR47842.1
Hypothetical protein; KEGG: btl:BALH_4643 0.0010 ptsH; phosphocarrier protein HPr K00889.
   
 0.663
EDR46633.1
Hypothetical protein; KEGG: btl:BALH_3665 0.0017 ptsH; phosphocarrier protein HPr K00889; Psort location: Cytoplasmic, score: 8.87.
   
 0.663
EDR48464.1
Phosphocarrier, HPr family; KEGG: btl:BALH_3665 2.4e-11 ptsH; phosphocarrier protein HPr K00889; COG: COG1925 Phosphotransferase system, HPr-related proteins; Psort location: Cytoplasmic, score: 9.98.
   
 0.653
crh
HPr-like protein crh; KEGG: btl:BALH_4643 1.3e-10 ptsH; phosphocarrier protein HPr K00889; COG: COG1925 Phosphotransferase system, HPr-related proteins; Psort location: Cytoplasmic, score: 9.65.
   
 0.653
pfkB
1-phosphofructokinase; KEGG: cno:NT01CX_1725 3.2e-87 1-phosphofructokinase K00882; COG: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Psort location: Cytoplasmic, score: 8.87; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.609
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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