STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45851.1Hypothetical protein; COG: COG4866 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87. (304 aa)    
Predicted Functional Partners:
EDR45850.1
Aminotransferase, class I/II; KEGG: cac:CAC2832 5.0e-114 PLP-dependent aminotransferase K00811; COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase; Psort location: Cytoplasmic, score: 8.87.
       0.789
EDR47692.1
Hypothetical protein; KEGG: fnu:FN1041 5.1e-11 acetyltransferase K00680; COG: COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases; Psort location: Cytoplasmic, score: 8.87.
 
     0.766
EDR47264.1
Glyoxalase family protein; KEGG: fnu:FN0356 4.7e-38 lactoylglutathione lyase K01759; COG: COG0346 Lactoylglutathione lyase and related lyases.
  
     0.672
hisC
KEGG: lla:L0065 6.3e-91 hisC; histidinol-phosphate aminotransferase K00817; COG: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Psort location: Cytoplasmic, score: 8.87; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
       0.636
EDR45848.1
Putative small multi-drug export protein; COG: COG2426 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.582
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).
 
      0.540
EDR47935.1
Hypothetical protein; KEGG: fnu:FN1387 1.7e-33 metal dependent hydrolase; COG: COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold; Psort location: Cytoplasmic, score: 8.87.
  
     0.512
EDR45847.1
3-deoxy-7-phosphoheptulonate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).
       0.456
EDR45852.1
Amidohydrolase; KEGG: bca:BCE_3698 2.1e-83 hipO; peptidase, M20/M25/M40 family K01436; COG: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; Psort location: Cytoplasmic, score: 8.87.
       0.439
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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