STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45895.1Hypothetical protein. (50 aa)    
Predicted Functional Partners:
EDR47246.1
Hypothetical protein.
  
     0.761
EDR47802.1
Hypothetical protein.
  
     0.704
EDR45761.1
Hypothetical protein; KEGG: poy:PAM621 0.0045 uvrD; ATP-dependent DNA helicase K03657; COG: KOG1181 FOG: Low-complexity; Psort location: Cytoplasmic, score: 8.87.
  
     0.692
EDR45892.1
Hypothetical protein; KEGG: cno:NT01CX_1620 4.1e-06 aminopeptidase K01269; Psort location: Cytoplasmic, score: 8.87.
 
     0.682
EDR47781.1
Hypothetical protein; KEGG: cpf:CPF_2806 4.3e-06 putative foldase protein PrsA K07533; COG: COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
     0.677
EDR48007.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.676
EDR45894.1
VanZ-like protein; COG: COG4767 Glycopeptide antibiotics resistance protein; Psort location: CytoplasmicMembrane, score: 9.26.
 
     0.666
EDR46186.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.657
EDR47098.1
Hypothetical protein.
  
     0.656
EDR46292.1
Septum formation initiator; Psort location: Cytoplasmic, score: 8.87.
  
     0.653
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.