STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45902.1Hypothetical protein; KEGG: shn:Shewana3_2682 0.0024 transcriptional regulator, CdaR K01694; COG: COG3835 Sugar diacid utilization regulator; Psort location: Cytoplasmic, score: 8.87. (315 aa)    
Predicted Functional Partners:
EDR45903.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.75.
 
     0.833
EDR47842.1
Hypothetical protein; KEGG: btl:BALH_4643 0.0010 ptsH; phosphocarrier protein HPr K00889.
  
     0.732
EDR45901.1
ABC transporter, ATP-binding protein; KEGG: dra:DR2153 2.4e-114 putative polar amino acid transport system ATP-binding protein K02028; COG: COG3839 ABC-type sugar transport systems, ATPase components; Psort location: CytoplasmicMembrane, score: 9.49; Belongs to the ABC transporter superfamily.
       0.570
EDR46633.1
Hypothetical protein; KEGG: btl:BALH_3665 0.0017 ptsH; phosphocarrier protein HPr K00889; Psort location: Cytoplasmic, score: 8.87.
  
     0.555
pyrF
KEGG: blo:BL0791 4.1e-64 pyrF; orotidine 5'-phosphate decarboxylase K01591; COG: COG0284 Orotidine-5-phosphate decarboxylase; Psort location: Cytoplasmic, score: 8.87; Belongs to the OMP decarboxylase family. Type 2 subfamily.
 
     0.450
EDR46172.1
COG: COG4862 Negative regulator of genetic competence, sporulation and motility; Psort location: Cytoplasmic, score: 8.87.
  
     0.426
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.