STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45906.1Efflux ABC transporter, permease protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. (302 aa)    
Predicted Functional Partners:
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
 
 0.998
EDR45905.1
Peptidase, M23 family; KEGG: ava:Ava_0183 1.0e-44 peptidase M23B K08259; COG: COG0739 Membrane proteins related to metalloendopeptidases; Psort location: Extracellular, score: 9.73.
 
 
 
 0.991
EDR45618.1
Hypothetical protein; KEGG: ava:Ava_0183 2.2e-10 peptidase M23B K08259; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Extracellular, score: 9.95.
 
 
 
 0.964
EDR45908.1
Hypothetical protein; KEGG: shn:Shewana3_2682 0.0019 transcriptional regulator, CdaR K01694; COG: COG3835 Sugar diacid utilization regulator; Psort location: Cytoplasmic, score: 8.87.
       0.802
EDR46510.1
NlpC/P60 family protein; KEGG: bce:BC5234 3.6e-13 N-acetylmuramoyl-L-alanine amidase K01446; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Extracellular, score: 9.73.
 
  
 0.768
EDR46509.1
NlpC/P60 family protein; KEGG: sfl:SF1683 5.6e-13 ydhO; putative lipoprotein K01183; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Extracellular, score: 9.73.
 
  
 0.759
EDR45904.1
Peptidase, S41 family; KEGG: cac:CAC0499 1.1e-68 carboxyl-terminal protease K03797; COG: COG0793 Periplasmic protease; Belongs to the peptidase S41A family.
       0.684
EDR45909.1
Glycosyl transferase WecB/TagA/CpsF family protein; KEGG: tte:TTE2163 1.1e-09 wecG; teichoic acid biosynthesis proteins; COG: COG1922 Teichoic acid biosynthesis proteins; Psort location: Cytoplasmic, score: 8.87.
 
     0.622
EDR46511.1
NlpC/P60 family protein; KEGG: bat:BAS5084 6.4e-11 N-acetylmuramoyl-L-alanine amidase, C-terminus K01446; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Extracellular, score: 9.73.
 
  
 0.599
EDR48053.1
Transglycosylase; KEGG: swo:Swol_1109 1.1e-88 peptidoglycan glycosyltransferase K05364; COG: COG0744 Membrane carboxypeptidase (penicillin-binding protein); Psort location: Extracellular, score: 9.55.
 
   
 0.490
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.