STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45909.1Glycosyl transferase WecB/TagA/CpsF family protein; KEGG: tte:TTE2163 1.1e-09 wecG; teichoic acid biosynthesis proteins; COG: COG1922 Teichoic acid biosynthesis proteins; Psort location: Cytoplasmic, score: 8.87. (233 aa)    
Predicted Functional Partners:
EDR47852.1
KEGG: tcx:Tcr_1675 1.1e-72 undecaprenyl-phosphate galactosephosphotransferase K03606; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.868
EDR46218.1
Tetratricopeptide repeat protein; KEGG: mpe:MYPE6470 3.3e-58 parC; DNA topoisomerase IV subunit A K02621; COG: KOG1181 FOG: Low-complexity; Psort location: Extracellular, score: 7.62.
  
     0.738
EDR48008.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.736
EDR47024.1
Hypothetical protein.
  
     0.724
EDR48007.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.712
EDR46186.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.712
EDR47001.1
Tetratricopeptide repeat protein; KEGG: mth:MTH977 9.7e-10 endo-1,4-beta-glucanase related protein K01179; COG: COG3291 FOG: PKD repeat.
  
   
 0.705
EDR48006.1
Hypothetical protein.
  
     0.703
EDR47781.1
Hypothetical protein; KEGG: cpf:CPF_2806 4.3e-06 putative foldase protein PrsA K07533; COG: COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
     0.687
EDR45767.1
PHP domain protein; KEGG: mma:MM0508 1.1e-15 isoleucyl-tRNA synthetase K01870; COG: COG0613 Predicted metal-dependent phosphoesterases (PHP family); Psort location: Cytoplasmic, score: 8.87.
  
     0.686
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.