STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45910.1Hypothetical protein; COG: NOG17864 non supervised orthologous group. (75 aa)    
Predicted Functional Partners:
EDR48048.1
COG: COG0629 Single-stranded DNA-binding protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.697
EDR46287.1
Spore coat protein, CotS family; COG: NOG09979 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.645
EDR46591.1
LysM domain protein; COG: COG1388 FOG: LysM repeat; Psort location: Cytoplasmic, score: 8.87.
  
     0.626
EDR46291.1
Spore cortex protein YabQ (Spore_YabQ); Psort location: CytoplasmicMembrane, score: 9.26.
  
     0.564
EDR45911.1
Hypothetical protein; COG: COG3595 Uncharacterized conserved protein.
       0.553
EDR45912.1
COG: COG4709 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.553
EDR45913.1
Transcriptional regulator, PadR family; COG: COG1695 Predicted transcriptional regulators.
       0.553
EDR48525.1
Putative stage III sporulation protein AG; COG: NOG11553 non supervised orthologous group.
  
     0.541
EDR48526.1
Hypothetical protein; COG: NOG17862 non supervised orthologous group.
  
     0.537
EDR46846.1
Peptidase, S8/S53 family; KEGG: cpf:CPF_2369 2.9e-54 subtilase family protein; COG: COG1404 Subtilisin-like serine proteases; Psort location: Cytoplasmic, score: 8.87.
  
     0.532
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.