STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45919.1Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 0.00044 serine/threonine protein kinase with TPR repeats K00908; COG: COG0457 FOG: TPR repeat. (174 aa)    
Predicted Functional Partners:
hflX
GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
       0.762
EDR48008.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.744
EDR48007.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.735
EDR47024.1
Hypothetical protein.
  
     0.726
EDR46186.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.715
EDR47098.1
Hypothetical protein.
  
     0.714
EDR47509.1
Hypothetical protein; KEGG: ljo:LJ1840 0.0021 cell wall-associated serine proteinase K01361; Psort location: Cytoplasmic, score: 8.87.
  
     0.710
cadA
Cadmium-exporting ATPase; KEGG: tte:TTE2467 7.6e-134 zntA2; cation transport ATPases; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.701
EDR47117.1
Hypothetical protein; KEGG: mma:MM1325 1.2e-05 cheA; chemotaxis protein K03407; COG: KOG1181 FOG: Low-complexity.
  
     0.693
EDR47537.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.689
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.