STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45921.1KEGG: rru:Rru_A1450 2.8e-10 transcriptional regulator, ArsR family; COG: COG0640 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87. (122 aa)    
Predicted Functional Partners:
cadA
Cadmium-exporting ATPase; KEGG: tte:TTE2467 7.6e-134 zntA2; cation transport ATPases; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.864
cadA-2
Cadmium-exporting ATPase; KEGG: bce:BC0596 2.3e-167 zinc-transporting ATPase K01534; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.831
EDR48150.1
Hypothetical protein; KEGG: bce:BC0596 6.2e-219 zinc-transporting ATPase K01534; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.759
EDR45555.1
KEGG: dvu:DVU3332 3.6e-143 heavy metal translocating P-type ATPase; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score: 9.49.
 
  
 0.552
EDR45919.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 0.00044 serine/threonine protein kinase with TPR repeats K00908; COG: COG0457 FOG: TPR repeat.
       0.485
hflX
GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
       0.479
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
     
 0.463
EDR48568.1
Copper-exporting ATPase; KEGG: tde:TDE0008 2.6e-188 copper-translocating P-type ATPase K01533; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.450
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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