STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45948.1Hypothetical protein; KEGG: cac:CAC0404 2.2e-09 serine/threonine protein kinase fused to TPR repeats domain K08884; COG: COG0515 Serine/threonine protein kinase; Psort location: Cytoplasmic, score: 8.87. (508 aa)    
Predicted Functional Partners:
EDR45947.1
Hypothetical protein; KEGG: cpr:CPR_0968 7.0e-21 prtP; cell wall-associated serine proteinase, lactocepin precursor K01361; COG: NOG17334 non supervised orthologous group.
 
    0.952
EDR46191.1
Hypothetical protein; COG: COG1716 FOG: FHA domain; Psort location: Cytoplasmic, score: 8.87.
 
 
 
 0.929
EDR47518.1
Hypothetical protein; KEGG: rno:309804 1.3e-25 Cdc2l6_predicted; cell division cycle 2-like 6 (CDK8-like) (predicted) K02208; COG: COG1340 Uncharacterized archaeal coiled-coil protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.773
EDR47001.1
Tetratricopeptide repeat protein; KEGG: mth:MTH977 9.7e-10 endo-1,4-beta-glucanase related protein K01179; COG: COG3291 FOG: PKD repeat.
 
     0.769
EDR45757.1
Hypothetical protein; KEGG: ddi:DDB0191487 6.7e-06 kinX; LISK family protein kinase K05743; COG: NOG35986 non supervised orthologous group.
 
   
 0.764
EDR48008.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.759
EDR47848.1
Hypothetical protein; KEGG: pfa:PF13_0232 5.1e-11 Casein kinase II regulatory subunit, putative K03115; COG: KOG1477 SPRY domain-containing proteins.
  
     0.755
EDR48385.1
Putative phage shock protein B; KEGG: cal:orf19.2859 6.8e-09 SRP40; nonribosomal protein of the nucleolus and coiled bodies K01186; COG: COG5295 Autotransporter adhesin; Psort location: Cellwall, score: 9.93.
 
    0.748
EDR46312.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 7.63.
 
     0.744
EDR47410.1
Hypothetical protein; KEGG: mmu:18218 0.0063 Dusp8; dual specificity phosphatase 8 K04459; COG: NOG29868 non supervised orthologous group.
  
     0.743
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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