STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45950.1Oxidoreductase; COG: NOG16874 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (142 aa)    
Predicted Functional Partners:
EDR45951.1
Hypothetical protein; KEGG: ehi:1.t00095 0.00013 choline/ethanolamine kinase, putative K00894; COG: NOG22933 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.771
EDR45952.1
Glycosyltransferase, group 2 family protein; KEGG: sat:SYN_00376 1.1e-19 glycosyltransferase involved in cell wall biogenesis; COG: NOG10066 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.735
EDR45949.1
Radical SAM domain protein; COG: COG0535 Predicted Fe-S oxidoreductases; Psort location: Cytoplasmic, score: 8.87.
 
     0.729
EDR45953.1
Hypothetical protein; KEGG: sat:SYN_00363 5.2e-32 glutamate synthase [NADPH] small chain K00264; COG: COG0247 Fe-S oxidoreductase; Psort location: Cytoplasmic, score: 8.87.
 
     0.621
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
  
  
 0.619
EDR45954.1
SNARE-like domain protein; KEGG: pat:Patl_0395 1.8e-17 pyridine nucleotide-disulphide oxidoreductase dimerisation region K00520; COG: COG0398 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
   0.597
clpP
ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
    
   0.526
EDR46999.1
Putative endopeptidase Clp; KEGG: cpf:CPF_1931 9.5e-56 clpP; clp protease K01358; COG: COG0740 Protease subunit of ATP-dependent Clp proteases; Psort location: Cytoplasmic, score: 8.87.
    
   0.526
EDR45948.1
Hypothetical protein; KEGG: cac:CAC0404 2.2e-09 serine/threonine protein kinase fused to TPR repeats domain K08884; COG: COG0515 Serine/threonine protein kinase; Psort location: Cytoplasmic, score: 8.87.
 
    0.521
EDR45955.1
Hypothetical protein; KEGG: azo:azo2810 1.3e-06 conserved hypothetical protein K01010; COG: NOG13526 non supervised orthologous group.
 
    0.517
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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