STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45979.1ABC transporter, ATP-binding protein; KEGG: cch:Cag_1327 4.7e-63 ATPase K06147; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00. (590 aa)    
Predicted Functional Partners:
EDR45978.1
KEGG: reh:H16_A0776 2.7e-83 ABC-type transporter, ATPase and permease components: Prot2E family; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 
0.879
EDR46793.1
ABC transporter, ATP-binding protein; KEGG: hhe:HH0347 5.7e-81 glnQ_1; conserved hypothetical protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
     
0.587
EDR45980.1
KEGG: shn:Shewana3_3435 1.1e-12 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score: 9.65; Belongs to the LysR transcriptional regulatory family.
       0.505
EDR46574.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0453 3.7e-77 ATPase K06147; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 
0.478
EDR46409.1
KEGG: reh:H16_A0776 2.0e-87 ABC-type transporter, ATPase and permease components: Prot2E family; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 
0.466
EDR45622.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_1482 4.2e-85 ATPase K06147; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 
0.454
EDR46726.1
KEGG: fal:FRAAL5379 1.7e-51 ABC transporter ATP-binding protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
     
0.431
EDR45977.1
Tetratricopeptide repeat protein; KEGG: eci:UTI89_C2868 4.9e-21 yphG; hypothetical protein YphG K00754; COG: NOG06209 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.428
nagB-2
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
   
   0.410
EDR45593.1
ABC transporter, ATP-binding protein; KEGG: rru:Rru_A2339 1.8e-70 ABC transporter component K06021; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 
0.404
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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