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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46017.1ParB-like protein; KEGG: pub:SAR11_0354 2.2e-47 parB; chromosome partitioning protein K03497; COG: COG1475 Predicted transcriptional regulators; Belongs to the ParB family. (302 aa)    
Predicted Functional Partners:
EDR46016.1
CobQ/CobB/MinD/ParA nucleotide binding domain protein; KEGG: cch:Cag_1803 4.2e-69 ATPase, ParA family K03496; COG: COG1192 ATPases involved in chromosome partitioning; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.989
EDR46116.1
CobQ/CobB/MinD/ParA nucleotide binding domain protein; KEGG: cch:Cag_1803 3.3e-46 ATPase, ParA family K03496; COG: COG1192 ATPases involved in chromosome partitioning; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.962
EDR45472.1
CobQ/CobB/MinD/ParA nucleotide binding domain protein; KEGG: rru:Rru_A3627 1.8e-45 cobyrinic acid a,c-diamide synthase K03496; COG: COG1192 ATPases involved in chromosome partitioning; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.962
EDR46018.1
Hypothetical protein; COG: NOG16916 non supervised orthologous group.
  
   0.853
EDR46020.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.799
EDR47609.1
ParB-like protein; KEGG: pub:SAR11_0354 4.0e-08 parB; chromosome partitioning protein K03497; COG: COG1475 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87; Belongs to the ParB family.
 
   
0.796
serS
serine--tRNA ligase; KEGG: pfu:PF1204 1.8e-86 seryl-tRNA synthetase K01875; COG: COG0172 Seryl-tRNA synthetase; Psort location: Cytoplasmic, score: 10.00.
       0.792
EDR47000.1
FtsK/SpoIIIE family protein; KEGG: pen:PSEEN2212 5.8e-117 ftsK; cell division protein FtsK; COG: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.742
gidB
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.624
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.609
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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