STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46023.1Hypothetical protein. (65 aa)    
Predicted Functional Partners:
EDR46022.1
Kinase domain protein; KEGG: lac:LBA1317 2.9e-24 serine-threonine protein kinase K08884; COG: COG0515 Serine/threonine protein kinase; Psort location: Cytoplasmic, score: 9.65.
       0.509
EDR46024.1
Kinase domain protein; KEGG: rha:RHA1_ro03696 1.5e-23 probable serine/threonine protein kinase K08884; COG: COG0515 Serine/threonine protein kinase; Psort location: Cytoplasmic, score: 9.98.
       0.493
EDR46025.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.493
EDR46026.1
KEGG: cpt:CpB0409 2.7e-19 protein phosphatase K01090; COG: COG0631 Serine/threonine protein phosphatase; Psort location: Cytoplasmic, score: 8.87.
       0.493
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.